Pseudovibrio sp. FO-BEG1

rodfacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Pseudovibrio

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusPseudovibrio
SpeciesPseudovibrio sp. FO-BEG1
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcoral; Marine
Biotic relationshipsymbionts
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudovibrio sp. FO-BEG1 plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

106125 bp

Thymine Count

102936 bp

Guanine Count

113322 bp

Cytosine Count

118729 bp

Genome Length

441112 bp

Protein-coding Genes

377 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system translocon subunit sctePSE_RS18055Not AvailableNegative4022993 - 402405736074.6
hypothetical proteinPSE_RS18060Not AvailableNegative4024099 - 402465020962.6
hypothetical proteinPSE_RS18065Not AvailableNegative4024884 - 402525814541.8
hypothetical proteinPSE_RS18070Not AvailableNegative4025264 - 402564414139.4
hypothetical proteinPSE_RS18075Not AvailableNegative4025722 - 402735960291.0
hypothetical proteinPSE_RS18080Not AvailableNegative4027375 - 402777314585.1
hrpj domain-containing proteinPSE_RS18085Not AvailablePositive4027986 - 402927246647.4
cest family type iii secretion system chaperonePSE_RS18090Not AvailablePositive4029339 - 402971313106.5
crp/fnr family transcriptional regulatorPSE_RS18095Not AvailablePositive4030086 - 403087128629.8
esce/ysce/ssae family type iii secretion system needle protein co-chaperonePSE_RS18100Not AvailablePositive4030906 - 40311459012.45

Displaying genes 3991 – 4000 of 5320 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

38 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000433malonateC3H2O4Chemical structure of malonateNot available
Average102.0456Da
Monoisotopic101.9953086Da
BASm0000686vanillateC8H7O4Chemical structure of vanillateNot available
Average167.1388Da
Monoisotopic167.0344337Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001111keto-D-tagaturonateC6H9O7Chemical structure of keto-D-tagaturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00014072,5-dichlorohydroquinoneC6H4Cl2O2Chemical structure of 2,5-dichlorohydroquinoneNot available
Average179Da
Monoisotopic177.9588348Da
BASm00016432,5-dichlorocyclohexa-2,5-dien-1,4-diolC6H6Cl2O2Chemical structure of 2,5-dichlorocyclohexa-2,5-dien-1,4-diolNot available
Average181.01Da
Monoisotopic179.9744848Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da

Displaying 1–10 of 38 metabolites

Health Effects

No health effects information available for this bacterium.