Dietzia cinnamea P4

Gram-positiveAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Dietziaceae

Genus

Dietzia

Description

Dietzia cinnamea P4 is a Gram-positive, rod-shaped bacterium that falls under the category of thermophiles, thriving optimally at elevated temperatures. It is a chemoheterotroph, deriving its energy and carbon from organic compounds while exhibiting a facultative anaerobic metabolism, allowing it to survive in both aerobic and anaerobic environments. This versatile microbe can be found in various environments, including soil, water, and diverse biological substrates, making it adaptable to numerous body sites across different host species. As a Gram-positive bacterium, *Dietzia cinnamea P4* possesses a thick peptidoglycan layer in its cell wall, which is characteristic of this group and aids in its resilience and ability to withstand environmental stresses. Its rod shape contributes to its motility and ability to colonize different niches. The thermophilic nature of this organism implies that it can thrive at high temperatures, which is particularly beneficial in hot environments, such as hot springs or compost piles.Being a chemoheterotroph, *Dietzia cinnamea P4* cannot produce its own energy through photosynthesis; instead, it relies on organic matter for nutrition. Its facultative anaerobic capabilities enable it to adapt to varying oxygen levels, utilizing fermentation pathways in the absence of oxygen while preferring aerobic respiration when possible. Furthermore, *Dietzia cinnamea P4* is noted for its unique metabolic properties, including the potential to degrade complex organic compounds, such as hydrocarbons, making it significant in bioremediation applications. Its ability to thrive in diverse environments and utilize different substrates positions it as an organism of interest for studies related to environmental microbiology and biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyDietziaceae
GenusDietzia
SpeciesDietzia cinnamea
StrainP4

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsandy loam (Cambisol) soil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dietzia cinnamea P4


Gene Summary

Adenine Count

514727 bp

Thymine Count

517724 bp

Guanine Count

1260083 bp

Cytosine Count

1262761 bp

Genome Length

3555295 bp

Protein-coding Genes

3538 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposase of isaar35, is481 family proteinES5_12675Not AvailableNegative2495185 - 249592828014.3
fad-linked oxidaseES5_12680Not AvailableNegative2496273 - 249759548131.0
tetr family transcriptional regulatorES5_12685Not AvailablePositive2497750 - 249838823388.8
hypothetical proteinES5_12690Not AvailablePositive2498381 - 249957741728.0
hypothetical proteinES5_12695Not AvailablePositive2499574 - 250090847098.8
putative transmembrane efflux protein (mfs)ES5_12700Not AvailablePositive2500905 - 250214642427.0
atp-dependent dead-box rna helicase deadES5_12705Not AvailablePositive2502202 - 250424173980.0
hypothetical proteinES5_12710Not AvailableNegative2504316 - 250502924740.1
helicaseES5_12715Not AvailablePositive2505423 - 250823099117.5
zinc finger swim domain proteinES5_12720Not AvailablePositive2508227 - 250897926973.8

Displaying genes 2531 – 2540 of 3590 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

388 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001593L-xylo-hex-3-ulonolactoneC6H8O6Chemical structure of L-xylo-hex-3-ulonolactoneNot available
Average176.1241Da
Monoisotopic176.032087988Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm00022412-demethylmenaquinone-8C50H70O2Chemical structure of 2-demethylmenaquinone-8Not available
Average703.0896Da
Monoisotopic702.5375815Da

Displaying 1–10 of 388 metabolites

Health Effects

No health effects information available for this bacterium.