Dietzia cinnamea P4

Gram-positiveAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Dietziaceae

Genus

Dietzia

Description

Dietzia cinnamea P4 is a Gram-positive, rod-shaped bacterium that falls under the category of thermophiles, thriving optimally at elevated temperatures. It is a chemoheterotroph, deriving its energy and carbon from organic compounds while exhibiting a facultative anaerobic metabolism, allowing it to survive in both aerobic and anaerobic environments. This versatile microbe can be found in various environments, including soil, water, and diverse biological substrates, making it adaptable to numerous body sites across different host species. As a Gram-positive bacterium, *Dietzia cinnamea P4* possesses a thick peptidoglycan layer in its cell wall, which is characteristic of this group and aids in its resilience and ability to withstand environmental stresses. Its rod shape contributes to its motility and ability to colonize different niches. The thermophilic nature of this organism implies that it can thrive at high temperatures, which is particularly beneficial in hot environments, such as hot springs or compost piles.Being a chemoheterotroph, *Dietzia cinnamea P4* cannot produce its own energy through photosynthesis; instead, it relies on organic matter for nutrition. Its facultative anaerobic capabilities enable it to adapt to varying oxygen levels, utilizing fermentation pathways in the absence of oxygen while preferring aerobic respiration when possible. Furthermore, *Dietzia cinnamea P4* is noted for its unique metabolic properties, including the potential to degrade complex organic compounds, such as hydrocarbons, making it significant in bioremediation applications. Its ability to thrive in diverse environments and utilize different substrates positions it as an organism of interest for studies related to environmental microbiology and biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyDietziaceae
GenusDietzia
SpeciesDietzia cinnamea
StrainP4

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dietzia cinnamea P4


Gene Summary

Adenine Count

514727 bp

Thymine Count

517724 bp

Guanine Count

1260083 bp

Cytosine Count

1262761 bp

Genome Length

3555295 bp

Protein-coding Genes

3538 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinES5_00005Not Available+1 - 1987341.51
hypothetical proteinES5_00010Not Available+1178 - 194825458.8
superoxide dismutase copper/zinc binding proteinES5_00015Not Available+2380 - 308423988.5
5s ribosomal rnaNot AvailableNot Available+2557 - 2673Not Available
uncharacterized peroxidase-related enzymeES5_00020Not Available-3157 - 372921327.5
hypothetical proteinES5_00025Not Available-3834 - 424415409.2
putative transport proteinES5_00030Not Available+4389 - 576548162.9
hypothetical proteinES5_00035Not Available-5928 - 655722778.9
alkylhydroperoxidase like protein, ahpd familyES5_00040Not Available+6627 - 719020914.5
rna polymerase, sigma-24 subunit, ecf subfamily proteinES5_00045Not Available+7187 - 814634341.1

Displaying genes 1 – 10 of 3590 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

159 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001921(S)-3-methyl-2-oxopentanoateC6H9O3Chemical structure of (S)-3-methyl-2-oxopentanoate1460-34-0
Average129.1339Da
Monoisotopic129.0551692Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da
BASm0003566cob(I)yrinate a,c diamideC45H61CoN6O12Chemical structure of cob(I)yrinate a,c diamideNot available
Average936.932Da
Monoisotopic936.3679466Da
BASm0003971heme bC34H30FeN4O4Not available14875-96-8
Average614.484Da
Monoisotopic614.162739Da

Displaying 1–10 of 159 metabolites