Rhizobium subbaraonis

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium subbaraonis is a Gram-negative, rod-shaped bacterium characterized by its facultative aerobe/anaerobe nature, allowing it to thrive in varying oxygen conditions. This species exhibits optimal growth at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. As a member of the Rhizobium genus, R. subbaraonis is recognized for its symbiotic relationships with leguminous plants, where it contributes to nitrogen fixation, an essential process for enhancing soil fertility. The ability of this microbe to adapt to both aerobic and anaerobic environments suggests a versatile metabolic capability, enabling it to occupy diverse ecological niches within soil and plant root zones. The facultative anaerobic metabolism of R. subbaraonis may facilitate its persistence in different soil conditions, including those with fluctuating oxygen levels, thereby enhancing its ecological resilience. Furthermore, the optimal growth temperature aligns with typical environmental conditions in temperate regions, suggesting its potential prevalence in agricultural systems where legumes are cultivated. This adaptability not only underscores the microbe's ecological significance in nitrogen cycling but also highlights its potential role in sustainable agricultural practices. Understanding the specific interactions and contributions of R. subbaraonis within its ecosystem may provide valuable insights into improving soil health and crop productivity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium subbaraonis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium subbaraonis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium subbaraonis strain JC85 genome assembly, contig:

Gene Summary

Adenine Count

1216369 bp

Thymine Count

1211608 bp

Guanine Count

2071950 bp

Cytosine Count

2075976 bp

Genome Length

6576489 bp

Protein-coding Genes

6116 genes

Non-Coding Genes

217 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptide transport system permease proteinSAMN05892877_115131Not AvailablePositive4655450 - 465636732736.2
dipeptide transport system atp-binding proteinSAMN05892877_115132Not AvailablePositive4656367 - 465722131194.1
dipeptide transport system atp-binding proteinSAMN05892877_115133Not AvailablePositive4657218 - 465804530784.7
gluconate kinase (ski family)SAMN05892877_115134Not AvailablePositive4658054 - 465858118493.1
enamine deaminase rida (yjgf/yer057c/uk114 family)SAMN05892877_115135Not AvailablePositive4658754 - 465910112229.6
sigma-70-like proteinSAMN05892877_115136Not AvailableNegative4659219 - 466002229192.0
hypothetical proteinSAMN05892877_115137Not AvailablePositive4660172 - 46603576815.06
outer membrane protein with glycine zipperSAMN05892877_115138Not AvailableNegative4660431 - 46606918420.15
uncharacterized protein duf3309SAMN05892877_115139Not AvailableNegative4660724 - 46608795348.12
uncharacterized protein yjbj (upf0337 family)SAMN05892877_115140Not AvailablePositive4661069 - 46612667746.04

Displaying genes 4551 – 4560 of 6333 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.