Treponema brennaborense DSM 12168

Gram-negativeSpirillaMotileAnaerobic

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

This strain is part of the GEBA (A Genomic Encyclopedia of Bacteria and Archaea) project. (NCBI BioProject: bp_list[1])

Taxonomy

Kingdom	Pseudomonadati
Phylum	Spirochaetota
Class	Spirochaetia
Order	Spirochaetales
Family	Treponemataceae
Genus	Treponema
Species	Treponema brennaborense
Strain	DSM 12168

Profile

Physiology
Gram staining properties	Negative
Shape	Spirilla
Mobility	Yes
Flagellar presence	Yes
Number of membranes	Not Available

AI-generated image based on bacteria physiology

Ecology, Host, and Life Cycle
Oxygen requirements	Anaerobic
Optimal temperature	Not Available
Temperature range	Mesophilic
Habitat	HostAssociated
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Treponema brennaborense DSM 12168, complete sequence.

NC_015500.1

Gene Summary

Adenine Count

742160 bp

Thymine Count

740623 bp

Guanine Count

786282 bp

Cytosine Count

786515 bp

Genome Length

3055580 bp

Protein-coding Genes

2585 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
abc transporter atp-binding protein	TREBR_RS04725	Not Available	Negative	1124050 - 1124748	25658.0
gnvr domain-containing protein	TREBR_RS04730	Not Available	Positive	1124927 - 1125955	37556.4
polysaccharide biosynthesis/export family protein	TREBR_RS04735	Not Available	Positive	1125960 - 1127549	58558.2
tyrosine--trna ligase	TREBR_RS04740	Not Available	Positive	1127699 - 1128937	45175.2
hypothetical protein	TREBR_RS04745	Not Available	Positive	1128954 - 1129790	31137.3
hypothetical protein	TREBR_RS04750	Not Available	Positive	1130162 - 1130356	7322.91
16s ribosomal rna	Not Available	Not Available	Positive	1130392 - 1131933	Not Available
Trna-ala	Not Available	Not Available	Positive	1132086 - 1132159	Not Available
23s ribosomal rna	Not Available	Not Available	Positive	1132449 - 1135425	Not Available
5s ribosomal rna	Not Available	Not Available	Positive	1135525 - 1135633	Not Available

Displaying genes 941 – 950 of 2647 in total

Pathways

308 pathways

2,3-Dihydroxybenzoate Biosynthesis

Biosynthesis of Siderophore Group Nonribosomal Peptides

Lysine Biosynthesis

Ornithine Metabolism

Palmitate Biosynthesis

Fatty Acid Elongation (Saturated)

tRNA Charging

Glycine Biosynthesis

Show All 308 Pathways

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000253	2-oxopent-4-enoateC5H5O3	Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000260	3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000274	aldehydo-D-galacturonateC6H9O7	Not available	Average193.132Da Monoisotopic193.0353762Da
BASm0000592	(S)-1-phenylethanolC8H10O	Not available	Average122.1644Da Monoisotopic122.0731649Da
BASm0001225	dodecanoateC12H23O2	Not available	Average199.3098Da Monoisotopic199.169805Da
BASm0001661	Cu(2+)Cu	`7440-50-8`	Average63.546Da Monoisotopic62.929601079Da
BASm0001696	2-heptyl-3-hydroxy-4(1H)-quinoloneC16H21NO2	Not available	Average259.349Da Monoisotopic259.15722892Da
BASm0001808	corynebactinC39H42N6O18	Not available	Average882.789Da Monoisotopic882.2555585Da
BASm0002146	(1R,2S)-1,2-dihydronaphthalene-1,2-diolC10H10O2	Not available	Average162.1852Da Monoisotopic162.0680796Da
BASm0002198	beta-D-ribofuranoseC5H10O5	`50-69-1`	Average150.1299Da Monoisotopic150.05282343Da

Displaying 1–10 of 158 metabolites

Health Effects

No health effects information available for this bacterium.