Spirochaeta africana DSM 8902

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Spirochaetaceae

Genus

Spirochaeta

Description

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilySpirochaetaceae
GenusSpirochaeta
SpeciesSpirochaeta africana
StrainDSM 8902

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Spirochaeta africana DSM 8902
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spirochaeta africana DSM 8902, complete sequence.

Gene Summary

Adenine Count

690920 bp

Thymine Count

696823 bp

Guanine Count

946004 bp

Cytosine Count

952108 bp

Genome Length

3285855 bp

Protein-coding Genes

2801 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSPIAF_RS01735Not AvailablePositive418446 - 41899118548.7
abc-f family atp-binding cassette domain-containing proteinSPIAF_RS01740O05519Negative418996 - 42062159628.3
transglycosylase domain-containing proteinSPIAF_RS14420O66874Negative420665 - 42311289445.5
do family serine endopeptidaseSPIAF_RS01750F6AA62Positive423230 - 42474153136.6
hypothetical proteinSPIAF_RS01755Not AvailablePositive424764 - 42545024394.8
shikimate kinaseSPIAF_RS01760A1WZB0Negative425491 - 42599117415.9
endonuclease iii domain-containing proteinSPIAF_RS01765Q58829Negative426068 - 42692831595.8
hd domain-containing phosphohydrolaseSPIAF_RS14425Q9KSG1Positive426976 - 42875167029.1
cation-transporting p-type atpaseSPIAF_RS01775P63688Negative428772 - 43145096723.4
deoxyribonuclease ivSPIAF_RS01780C6DYE3Positive431560 - 43241430935.5

Displaying genes 341 – 350 of 2859 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

123 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000542HgHgChemical structure of HgNot available
Average200.59Da
Monoisotopic201.9706256Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001279(6S)-5-methyl-5,6,7,8-tetrahydrofolateC20H23N7O6Chemical structure of (6S)-5-methyl-5,6,7,8-tetrahydrofolateNot available
Average457.4399Da
Monoisotopic457.1709815Da

Displaying 1–10 of 123 metabolites

Health Effects

No health effects information available for this bacterium.