Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas catoniae |
| Strain | ATCC 51270 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
508550 bp
Thymine Count
491378 bp
Guanine Count
510103 bp
Cytosine Count
530138 bp
Genome Length
2040170 bp
Protein-coding Genes
1579 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase, secb subunit-like protein | HMPREF0636_1338 | Not Available | Positive | 519501 - 519956 | 16985.2 |
| gmp synthase (glutamine-hydrolyzing) | HMPREF0636_1339 | Not Available | Positive | 520564 - 522084 | 56269.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | HMPREF0636_1340 | Not Available | Positive | 522195 - 523013 | 29242.6 |
| putative membrane protein | HMPREF0636_1341 | Not Available | Positive | 523058 - 523717 | 24204.8 |
| macb-like periplasmic core domain protein | HMPREF0636_1342 | Not Available | Negative | 523918 - 525177 | 46878.8 |
| pf01594 domain protein | HMPREF0636_1343 | Not Available | Negative | 525164 - 526369 | 45350.0 |
| glycoside hydrolase, family 20, catalytic domain protein | HMPREF0636_1344 | Not Available | Negative | 526768 - 528768 | 76124.4 |
| ribose-5-phosphate isomerase b | HMPREF0636_1345 | Not Available | Negative | 528803 - 529246 | 16137.3 |
| transketolase, thiamine pyrophosphate-binding domain protein | HMPREF0636_1346 | Not Available | Negative | 529265 - 531301 | 73941.3 |
| leucine--trna ligase | HMPREF0636_1347 | Not Available | Positive | 531819 - 534620 | 107169.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
