Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas catoniae |
| Strain | ATCC 51270 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
508550 bp
Thymine Count
491378 bp
Guanine Count
510103 bp
Cytosine Count
530138 bp
Genome Length
2040170 bp
Protein-coding Genes
1579 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | HMPREF0636_0999 | Not Available | Positive | 173059 - 173991 | 36563.5 |
| glycosyltransferase, group 2 family protein | HMPREF0636_1000 | Not Available | Positive | 174015 - 175052 | 39806.9 |
| atpase, aaa family | HMPREF0636_1001 | Not Available | Positive | 175370 - 176662 | 47339.7 |
| copper-exporting atpase | HMPREF0636_1002 | Not Available | Positive | 176785 - 178992 | 78731.9 |
| glycoside hydrolase, family 20, catalytic domain protein | HMPREF0636_1003 | Not Available | Negative | 179218 - 181467 | 85491.5 |
| phosphoserine transaminase | HMPREF0636_1005 | Not Available | Positive | 182713 - 183786 | 40082.9 |
| d-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein | HMPREF0636_1006 | Not Available | Positive | 183951 - 184874 | 33146.1 |
| pf06245 family protein | HMPREF0636_1007 | Not Available | Positive | 184919 - 186166 | 47484.7 |
| major fimbrial subunit protein type iv, fimbrillin, c-terminal domain protein | HMPREF0636_1008 | Not Available | Positive | 186287 - 187687 | 51150.0 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 188330 - 188438 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
