Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas catoniae |
| Strain | ATCC 51270 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
508550 bp
Thymine Count
491378 bp
Guanine Count
510103 bp
Cytosine Count
530138 bp
Genome Length
2040170 bp
Protein-coding Genes
1579 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(38-40) synthase | HMPREF0636_0513 | Not Available | Positive | 1832348 - 1833109 | 28546.2 |
| thymidylate synthase | HMPREF0636_0514 | Not Available | Positive | 1833729 - 1834523 | 30638.7 |
| dihydrofolate reductase | HMPREF0636_0515 | Not Available | Positive | 1834551 - 1835045 | 18763.5 |
| histidine--trna ligase | HMPREF0636_0516 | Not Available | Positive | 1835020 - 1836444 | 53757.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HMPREF0636_0517 | Not Available | Positive | 1836457 - 1838403 | 71791.9 |
| trk system potassium uptake protein trka, n-terminal domain protein | HMPREF0636_0518 | Not Available | Positive | 1838407 - 1839759 | 49820.4 |
| cation transport protein | HMPREF0636_0519 | Not Available | Positive | 1839781 - 1841232 | 53498.6 |
| peptidase c1-like domain protein | HMPREF0636_0520 | Not Available | Positive | 1841611 - 1842822 | 45583.1 |
| dna-binding protein hu | HMPREF0636_0521 | Not Available | Negative | 1843294 - 1843605 | 10955.5 |
| putative alpha-1,2-mannosidase | HMPREF0636_0522 | Not Available | Negative | 1843805 - 1846081 | 85931.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
