Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | Porphyromonas |
| Species | Porphyromonas catoniae |
| Strain | ATCC 51270 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
508550 bp
Thymine Count
491378 bp
Guanine Count
510103 bp
Cytosine Count
530138 bp
Genome Length
2040170 bp
Protein-coding Genes
1579 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pf04536 family protein | HMPREF0636_0383 | Not Available | Negative | 1682707 - 1684014 | 47282.9 |
| lema family protein | HMPREF0636_0384 | Not Available | Negative | 1684073 - 1684663 | 21975.2 |
| branched-chain-amino-acid transaminase | HMPREF0636_0385 | Not Available | Negative | 1685212 - 1686252 | 38912.6 |
| 2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit | HMPREF0636_0386 | Not Available | Negative | 1686289 - 1686837 | 19737.0 |
| thiamine pyrophosphate enzyme, c-terminal tpp binding domain protein | HMPREF0636_0387 | Not Available | Negative | 1686859 - 1687632 | 27925.8 |
| hypothetical protein | HMPREF0636_0388 | Not Available | Negative | 1687645 - 1687851 | 8080.96 |
| pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine dip-binding domain protein | HMPREF0636_0389 | Not Available | Negative | 1687851 - 1688939 | 39790.2 |
| 4fe-4s dicluster domain protein | HMPREF0636_0390 | Not Available | Negative | 1688985 - 1689254 | 9855.96 |
| glucose-1-phosphate thymidylyltransferase | HMPREF0636_0391 | Not Available | Positive | 1689957 - 1690988 | 38121.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF0636_0392 | Not Available | Positive | 1690989 - 1691552 | 21048.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
