Singulisphaera acidiphila DSM 18658

sphere

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Isosphaerales

Family

Isosphaeraceae

Genus

Singulisphaera

Description

Singulisphaera acidiphila DSM 18658 is a spherical, chemotrophic organotroph that thrives optimally at a temperature of 25.0 °C. This microbe is characterized by its distinct spherical morphology, which is a key trait that may influence its interactions within various environments. As an organotroph, S. acidiphila utilizes organic compounds as its primary energy source, allowing it to play a potential role in nutrient cycling, particularly in environments rich in organic matter. The optimal growth temperature of 25.0 °C suggests that S. acidiphila is well-adapted to moderate, temperate conditions, which may be indicative of its natural habitat. This temperature preference aligns with a variety of ecosystems where organic substrates are prevalent, enabling S. acidiphila to contribute to the decomposition processes and the transformation of organic materials into simpler compounds. In terms of ecological significance, the ability of S. acidiphila to act as an organotrophic chemotroph positions it as a potential participant in biogeochemical cycles, particularly in acidic environments where organic matter is abundant. This may facilitate the breakdown of complex organic substances, thereby enhancing nutrient availability for other microorganisms. The unique combination of its spherical shape, temperature preference, and metabolic capabilities underscores the importance of S. acidiphila in microbial communities, particularly in environments undergoing organic matter degradation.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderIsosphaerales
FamilyIsosphaeraceae
GenusSingulisphaera
SpeciesSingulisphaera acidiphila
StrainDSM 18658

Profile

Physiology
Gram staining propertiesNot Available
Shapesphere
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceorganotroph; chemotroph
PathogenicityNot Available

Genome Summary

Singulisphaera acidiphila DSM 18658 plasmid pSINAC01, complete

Gene Summary

Adenine Count

10718 bp

Thymine Count

11114 bp

Guanine Count

16907 bp

Cytosine Count

15992 bp

Genome Length

54731 bp

Protein-coding Genes

28 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar-binding proteinSINAC_RS31995Not AvailableNegative8214591 - 821567939694.4
phosphoribosylformylglycinamidine cyclo-ligaseSINAC_RS32000Q7UI59Negative8215807 - 821688339090.3
cytochrome cSINAC_RS32005Not AvailablePositive8217201 - 821765916897.2
lipoate--protein ligase family proteinSINAC_RS32010Not AvailablePositive8217775 - 821850026364.8
2-oxoglutarate dehydrogenase e1 componentSINAC_RS32015Q59106Positive8218814 - 8221618105155.0
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseSINAC_RS32020Q1RHI5Positive8221620 - 822288243673.4
dihydrolipoyl dehydrogenaseSINAC_RS32025P31023Positive8223001 - 822441650291.2
hypothetical proteinSINAC_RS32030Not AvailablePositive8224687 - 822519019204.9
m56 family metallopeptidaseSINAC_RS32035Not AvailableNegative8225339 - 8228134101104.0
blai/meci/copy family transcriptional regulatorSINAC_RS32040Not AvailableNegative8228131 - 822855316066.4

Displaying genes 6301 – 6310 of 7376 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.