Massilia timonae CCUG 45783

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Massilia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusMassilia
SpeciesMassilia timonae
StrainCCUG 45783

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Massilia timonae CCUG 45783
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Massilia timonae CCUG 45783 cont1.76, whole genome shotgun

Gene Summary

Adenine Count

1046418 bp

Thymine Count

1041036 bp

Guanine Count

1987961 bp

Cytosine Count

1962985 bp

Genome Length

6038400 bp

Protein-coding Genes

5236 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rod shape-determining protein mrebHMPREF9710_03060P0A9X5Positive3574160 - 357520336988.1
rod shape-determining protein mrecHMPREF9710_03061Not AvailablePositive3575304 - 357625434137.0
rod shape-determining protein mredHMPREF9710_03062Not AvailablePositive3576363 - 357688119315.6
penicillin-binding protein 2HMPREF9710_03063P0AD67Positive3576898 - 357886872528.6
rod shape-determining protein rodaHMPREF9710_03064P0ABG8Positive3578872 - 357999040717.4
hypothetical proteinHMPREF9710_03065Not AvailableNegative3580178 - 358233177750.2
rare lipoprotein aHMPREF9710_03066Q9X6V6Positive3582529 - 358354236016.1
deltaproteobacterial gc-domain-containing protein sorting domainHMPREF9710_03067Not AvailableNegative3583633 - 358442728693.6
hypothetical proteinHMPREF9710_03068Not AvailableNegative3584644 - 358538726507.6
pantothenate kinase, type iiiHMPREF9710_03069A4G9B3Negative3585381 - 358612424841.0

Displaying genes 3111 – 3120 of 5315 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

307 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000234(3R)-hydroxybutanoate dimerC8H13O5Chemical structure of (3R)-hydroxybutanoate dimerNot available
Average189.188Da
Monoisotopic189.0768471Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000288aminohydroquinoneC6H7NO2Chemical structure of aminohydroquinoneNot available
Average125.127Da
Monoisotopic125.0476785Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 307 metabolites

Health Effects

No health effects information available for this bacterium.