Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, beta subunit | HMPREF9698_00698 | P05649 | Positive | 788829 - 789962 | 41309.1 |
| s4 domain-containing protein yaaa | HMPREF9698_00699 | P05650 | Positive | 790204 - 790437 | 8544.23 |
| dna replication and repair protein recf | HMPREF9698_00700 | Q03I57 | Positive | 790434 - 791588 | 44086.4 |
| dna gyrase subunit b | HMPREF9698_00701 | Q839Z1 | Positive | 791630 - 793579 | 72592.1 |
| dna gyrase, a subunit | HMPREF9698_00702 | O50628 | Positive | 793614 - 796082 | 92189.4 |
| hypothetical protein | HMPREF9698_00703 | Not Available | Negative | 796315 - 796443 | 5103.28 |
| ribosomal protein s6 | HMPREF9698_00704 | Q5FN09 | Positive | 796503 - 796805 | 11831.9 |
| single-strand binding protein | HMPREF9698_00705 | Q839Y9 | Positive | 796849 - 797400 | 20366.9 |
| 30s ribosomal protein s18 | HMPREF9698_00706 | Q74M26 | Positive | 797436 - 797672 | 9200.31 |
| hypothetical protein | HMPREF9698_00707 | A0A0H3GCG4 | Positive | 797905 - 799905 | 75428.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
