Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase small subunit | HMPREF9698_01603 | Not Available | Positive | 1760420 - 1760860 | 16897.8 |
| Putative terminase large subunit | HMPREF9698_01604 | Not Available | Positive | 1760857 - 1762095 | 47843.4 |
| Spp1 family portal protein | HMPREF9698_01605 | Not Available | Positive | 1762098 - 1763474 | 52558.8 |
| Minor capsid protein | HMPREF9698_01606 | Not Available | Positive | 1763481 - 1764371 | 34708.5 |
| Capsid and scaffold protein | HMPREF9698_01607 | Not Available | Positive | 1764515 - 1765129 | 23512.9 |
| Putative major capsid/head protein | HMPREF9698_01608 | A9CRA7 | Positive | 1765143 - 1765970 | 29634.2 |
| Dna packaging minor head protein | HMPREF9698_01609 | Not Available | Positive | 1766113 - 1766430 | 11999.2 |
| Hypothetical protein | HMPREF9698_01610 | Not Available | Positive | 1766427 - 1766723 | 11237.5 |
| Hypothetical protein | HMPREF9698_01611 | Not Available | Positive | 1766723 - 1767073 | 13122.9 |
| Capsid and scaffold protein | HMPREF9698_01612 | Not Available | Positive | 1767070 - 1767465 | 15256.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
