Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii, alpha subunit, gram-positive type | HMPREF9698_00310 | Q38W73 | Positive | 335889 - 340232 | 163562.0 |
| hypothetical protein | HMPREF9698_00311 | Q835V2 | Positive | 340393 - 340863 | 17682.1 |
| transcription termination factor nusa | HMPREF9698_00312 | P32727 | Positive | 340880 - 342205 | 48857.2 |
| hypothetical protein | HMPREF9698_00313 | P32728 | Positive | 342260 - 342556 | 11354.8 |
| hypothetical protein | HMPREF9698_00314 | P55768 | Positive | 342546 - 342848 | 11119.4 |
| translation initiation factor if-2 | HMPREF9698_00315 | Q835U8 | Positive | 342864 - 345224 | 86347.3 |
| ribosome-binding factor a | HMPREF9698_00316 | Q03FS2 | Positive | 345242 - 345598 | 13522.7 |
| trna pseudouridine synthase b | HMPREF9698_00317 | A8FDD4 | Positive | 345701 - 346615 | 33939.6 |
| riboflavin biosynthesis protein ribf | HMPREF9698_00318 | Q8Y7F2 | Positive | 346624 - 347583 | 36616.5 |
| heat-inducible transcription repressor hrca | HMPREF9698_00319 | O87775 | Positive | 347767 - 348798 | 38324.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
