Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridylate kinase | HMPREF9698_00300 | Q831V1 | Positive | 325880 - 326611 | 26456.1 |
| ribosome recycling factor | HMPREF9698_00301 | Q831V2 | Positive | 326604 - 327161 | 21000.9 |
| type i restriction enzyme ecor124ii m protein | HMPREF9698_00302 | P10484 | Positive | 327471 - 327731 | 9985.18 |
| hypothetical protein | HMPREF9698_00303 | Q5KVK2 | Positive | 328379 - 329398 | 37350.8 |
| hypothetical protein | HMPREF9698_00304 | O32168 | Positive | 329391 - 330092 | 25164.4 |
| yaec family lipoprotein | HMPREF9698_00305 | O32167 | Positive | 330115 - 331047 | 33907.9 |
| di-trans,poly-cis-decaprenylcistransferase | HMPREF9698_00306 | Q74IR9 | Positive | 331242 - 331979 | 28305.9 |
| hypothetical protein | HMPREF9698_00307 | Q5HPT0 | Positive | 331994 - 332788 | 28950.8 |
| rip metalloprotease rsep | HMPREF9698_00308 | Q9RPP2 | Positive | 332806 - 334074 | 46408.2 |
| proline-trna ligase | HMPREF9698_00309 | Q831W7 | Positive | 334099 - 335805 | 63638.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
