Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine phosphoribosyltransferase | HMPREF9698_00290 | Q88VH0 | Positive | 317662 - 318177 | 18765.7 |
| hypothetical protein | HMPREF9698_00291 | Not Available | Positive | 318209 - 319264 | 39214.8 |
| hypothetical protein | HMPREF9698_00292 | Not Available | Negative | 319319 - 319684 | 13548.8 |
| repressor lexa | HMPREF9698_00293 | Q834R0 | Negative | 319769 - 320410 | 23617.2 |
| hypothetical protein | HMPREF9698_00294 | Q04JM9 | Positive | 320575 - 320817 | 9365.14 |
| transketolase | HMPREF9698_00295 | P45694 | Positive | 320835 - 322826 | 72567.0 |
| upf0154 protein | HMPREF9698_00296 | Q49XD7 | Positive | 322924 - 323151 | 8707.28 |
| 1-acylglycerol-3-phosphate o-acyltransferase | HMPREF9698_00297 | Q8DNY1 | Negative | 323201 - 323818 | 23259.6 |
| 30s ribosomal protein s2 | HMPREF9698_00298 | Q88VJ4 | Positive | 324036 - 324800 | 28767.2 |
| translation elongation factor ts | HMPREF9698_00299 | Q1WUL4 | Positive | 324862 - 325740 | 32659.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
