Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | HMPREF9698_00241 | Q8ER21 | Positive | 261642 - 262523 | 33415.3 |
| ribulose-phosphate 3-epimerase | HMPREF9698_00242 | O34557 | Positive | 262542 - 263189 | 23387.9 |
| thiamine pyrophosphokinase | HMPREF9698_00243 | O34664 | Positive | 263198 - 263839 | 23838.2 |
| 50s ribosomal protein l28 | HMPREF9698_00244 | Q4L5S5 | Negative | 263879 - 264067 | 6864.52 |
| hypothetical protein | HMPREF9698_00245 | O34318 | Positive | 264321 - 264683 | 13297.0 |
| dak2 domain fusion protein ylov | HMPREF9698_00246 | Q49X07 | Positive | 264708 - 266378 | 59887.1 |
| atp-dependent dna helicase recg | HMPREF9698_00247 | O34942 | Positive | 266451 - 268478 | 76446.1 |
| fatty acid/phospholipid synthesis protein plsx | HMPREF9698_00248 | B9DSQ9 | Positive | 268489 - 269493 | 35520.8 |
| acyl carrier protein | HMPREF9698_00249 | B9DPJ1 | Positive | 269600 - 269842 | 9208.65 |
| oligopeptide/dipeptide abc transporter, atp-binding protein domain | HMPREF9698_00250 | P50980 | Positive | 270006 - 271013 | 37482.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
