Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase | HMPREF9698_00171 | A7X271 | Positive | 184549 - 185418 | 31871.8 |
| dihydrodipicolinate reductase | HMPREF9698_00172 | Q4L6A1 | Positive | 185415 - 186128 | 25867.4 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-acetyltransferase | HMPREF9698_00173 | Q2YXZ7 | Positive | 186138 - 186872 | 25930.9 |
| amidohydrolase | HMPREF9698_00174 | Q4L6A3 | Positive | 186898 - 188064 | 43370.0 |
| alanine racemase | HMPREF9698_00175 | P63482 | Positive | 188066 - 189133 | 40592.6 |
| diaminopimelate decarboxylase | HMPREF9698_00176 | Q5HG20 | Positive | 189133 - 190434 | 48150.2 |
| hypothetical protein | HMPREF9698_00177 | P16524 | Negative | 190570 - 191736 | 43082.1 |
| hypothetical protein | HMPREF9698_00178 | A0A0H2ZLQ1 | Positive | 191950 - 193092 | 42873.2 |
| uridine kinase | HMPREF9698_00179 | A8AWT2 | Positive | 193180 - 193815 | 24406.2 |
| transcription elongation factor grea | HMPREF9698_00180 | A8FFL6 | Positive | 193903 - 194376 | 17480.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
