Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recd/traa family helicase | HMPREF9698_00161 | O34481 | Positive | 172261 - 174675 | 89960.0 |
| hypothetical protein | HMPREF9698_00162 | Q49VS2 | Negative | 174718 - 175632 | 34069.8 |
| hypothetical protein | HMPREF9698_00163 | O34792 | Positive | 175710 - 176621 | 33251.1 |
| alanine-trna ligase | HMPREF9698_00164 | Q835J8 | Positive | 176974 - 179616 | 98500.0 |
| hypothetical protein | HMPREF9698_00165 | Not Available | Positive | 179721 - 180662 | 37629.6 |
| hypothetical protein | HMPREF9698_00166 | B2G6F4 | Positive | 180907 - 181179 | 10648.3 |
| rnase h-fold protein yqgf | HMPREF9698_00167 | Q04MP8 | Positive | 181176 - 181595 | 15457.8 |
| hypothetical protein | HMPREF9698_00168 | B3WC71 | Positive | 181604 - 181888 | 11068.3 |
| aspartate kinase | HMPREF9698_00169 | P08495 | Positive | 182336 - 183559 | 44406.0 |
| aspartate-semialdehyde dehydrogenase | HMPREF9698_00170 | Q04797 | Positive | 183552 - 184532 | 35537.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
