Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | HMPREF9698_00141 | Q82ZX1 | Positive | 153832 - 154515 | 25004.4 |
| d-serine ammonia-lyase | HMPREF9698_00142 | Q75TH5 | Negative | 154569 - 155906 | 49583.4 |
| cold shock-like protein cspd | HMPREF9698_00143 | Q81K90 | Positive | 156220 - 156426 | 7621.7 |
| rod shape-determining protein mrec | HMPREF9698_00144 | Q8Y6Y4 | Positive | 156642 - 157625 | 35783.9 |
| rod shape-determining protein mred | HMPREF9698_00145 | Not Available | Positive | 157627 - 158142 | 19593.7 |
| hypothetical protein | HMPREF9698_00146 | Q8Y6Y6 | Positive | 158159 - 158854 | 26156.0 |
| ribosomal protein l21 | HMPREF9698_00147 | Q92BH2 | Positive | 159076 - 159384 | 11353.6 |
| hypothetical protein | HMPREF9698_00148 | Not Available | Positive | 159397 - 159759 | 13110.1 |
| 50s ribosomal protein l27 | HMPREF9698_00149 | Q836X4 | Positive | 159746 - 160030 | 10051.0 |
| hypothetical protein | HMPREF9698_00150 | P37876 | Positive | 160183 - 161160 | 37108.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
