Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease iii | HMPREF9698_01318 | Q82ZG1 | Positive | 1625114 - 1625821 | 26809.5 |
| chromosome segregation protein smc | HMPREF9698_01319 | P51834 | Positive | 1625901 - 1629575 | 138364.0 |
| cof-like hydrolase | HMPREF9698_01320 | P0A8Y6 | Positive | 1629712 - 1630530 | 29814.0 |
| signal recognition particle-docking protein ftsy | HMPREF9698_01321 | P51835 | Positive | 1630572 - 1632059 | 53961.6 |
| hypothetical protein | HMPREF9698_01322 | B2GD39 | Positive | 1632090 - 1632425 | 13285.5 |
| signal recognition particle protein | HMPREF9698_01323 | P37105 | Positive | 1632433 - 1633932 | 55280.4 |
| ysirk family gram-positive signal peptide | HMPREF9698_01324 | Not Available | Positive | 1634321 - 1636115 | 65367.1 |
| hypothetical protein | HMPREF9698_01325 | Not Available | Positive | 1636116 - 1637450 | 49526.7 |
| hypothetical protein | HMPREF9698_01326 | Not Available | Positive | 1637881 - 1638714 | 31890.5 |
| hypothetical protein | HMPREF9698_01327 | Not Available | Positive | 1638832 - 1639161 | 12884.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
