Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide sugar dehydrogenase | HMPREF9698_01308 | O33952 | Positive | 1613759 - 1614931 | 43542.5 |
| hypothetical protein | HMPREF9698_01309 | Not Available | Positive | 1615033 - 1615989 | 37031.5 |
| hypothetical protein | HMPREF9698_01310 | Q48457 | Positive | 1616047 - 1617513 | 54931.9 |
| hypothetical protein | HMPREF9698_01311 | Not Available | Positive | 1617665 - 1618036 | 13963.0 |
| hypothetical protein | HMPREF9698_01312 | Q8CWR6 | Negative | 1618141 - 1619301 | 43848.8 |
| sigma-70 family rna polymerase sigma factor | HMPREF9698_01313 | Not Available | Positive | 1619634 - 1620176 | 21072.1 |
| hypothetical protein | HMPREF9698_01314 | P54525 | Positive | 1620173 - 1621123 | 35180.9 |
| hypothetical protein | HMPREF9698_01315 | Not Available | Negative | 1621346 - 1622188 | 32474.1 |
| ribokinase | HMPREF9698_01316 | Q9CF42 | Positive | 1622481 - 1623389 | 32160.2 |
| hypothetical protein | HMPREF9698_01317 | Not Available | Positive | 1623606 - 1624592 | 38428.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
