Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catabolite control protein a | HMPREF9698_01219 | O07329 | Positive | 1513723 - 1514724 | 36777.7 |
| hypothetical protein | HMPREF9698_01220 | P39793 | Negative | 1514846 - 1517461 | 96147.4 |
| hypothetical protein | HMPREF9698_01221 | Q5WEM1 | Negative | 1517616 - 1518584 | 37990.6 |
| hypothetical protein | HMPREF9698_01222 | P0AFV6 | Positive | 1518853 - 1520682 | 66375.4 |
| pepf/m3 family oligoendopeptidase | HMPREF9698_01223 | Not Available | Negative | 1521202 - 1523007 | 68527.9 |
| yebc/pmpr family dna-binding regulatory protein | HMPREF9698_01224 | Q838A9 | Positive | 1523215 - 1523934 | 26674.6 |
| hypothetical protein | HMPREF9698_01225 | P42318 | Negative | 1524117 - 1525232 | 42951.0 |
| hypothetical protein | HMPREF9698_01226 | Not Available | Negative | 1525555 - 1525728 | 6364.57 |
| hypothetical protein | HMPREF9698_01227 | P25953 | Positive | 1526036 - 1527100 | 39927.1 |
| hypothetical protein | HMPREF9698_01228 | Q9K920 | Positive | 1527054 - 1528115 | 40131.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
