Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9698_00044 | Not Available | Positive | 53745 - 54245 | 19685.1 |
| udp-n-acetylmuramate-alanine ligase | HMPREF9698_00045 | Q833N6 | Positive | 54317 - 55648 | 49767.5 |
| dna polymerase i | HMPREF9698_00046 | O34996 | Positive | 55854 - 58517 | 100606.0 |
| formamidopyrimidine-dna glycosylase | HMPREF9698_00047 | Q837G3 | Positive | 58555 - 59379 | 31266.8 |
| dephospho-coa kinase | HMPREF9698_00048 | Q3ABL6 | Positive | 59399 - 60004 | 22483.8 |
| transcriptional regulator nrdr | HMPREF9698_00049 | B7GGU9 | Positive | 60196 - 60654 | 17749.0 |
| hypothetical protein | HMPREF9698_00050 | Not Available | Positive | 60671 - 62047 | 52119.9 |
| hypothetical protein | HMPREF9698_00051 | P06567 | Positive | 62047 - 63000 | 36560.7 |
| threonyl-trna synthetase | HMPREF9698_00052 | Q830D0 | Positive | 63315 - 65264 | 74427.6 |
| hypothetical protein | HMPREF9698_00053 | Not Available | Positive | 65816 - 66696 | 34073.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
