Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9698_01157 | Not Available | Negative | 1264532 - 1265464 | 32162.9 |
| hypothetical protein | HMPREF9698_01158 | Not Available | Positive | 1266114 - 1267412 | 45679.8 |
| hypothetical protein | HMPREF9698_01159 | P74921 | Negative | 1267554 - 1268270 | 26858.7 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | HMPREF9698_01160 | Q9WYH8 | Negative | 1268260 - 1269039 | 28652.3 |
| aminodeoxychorismate synthase, component i | HMPREF9698_01161 | F2RB79 | Negative | 1269042 - 1271066 | 76361.0 |
| 3-dehydroquinate dehydratase, type ii | HMPREF9698_01162 | Q8XMI6 | Negative | 1271063 - 1271506 | 16654.7 |
| shikimate 5-dehydrogenase | HMPREF9698_01163 | A6M251 | Negative | 1271484 - 1272776 | 47955.7 |
| chorismate synthase | HMPREF9698_01164 | Q58575 | Negative | 1272773 - 1273864 | 40226.9 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HMPREF9698_01165 | B9DZT0 | Negative | 1273854 - 1275080 | 44572.2 |
| 3-dehydroquinate synthase | HMPREF9698_01166 | Q8RB14 | Negative | 1275082 - 1276125 | 38832.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
