Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | HMPREF9698_00015 | Q82ZA2 | Positive | 18922 - 21519 | 97989.0 |
| dna mismatch repair protein mutl | HMPREF9698_00016 | A3CR14 | Positive | 21534 - 23507 | 73228.6 |
| methionine-r-sulfoxide reductase | HMPREF9698_00017 | Q1WVT3 | Positive | 23519 - 23950 | 16681.2 |
| hypothetical protein | HMPREF9698_00018 | O07585 | Positive | 23987 - 25357 | 51346.9 |
| holliday junction dna helicase ruva | HMPREF9698_00019 | A5VIX1 | Positive | 25506 - 26111 | 22271.7 |
| holliday junction dna helicase ruvb | HMPREF9698_00020 | Q839T5 | Positive | 26138 - 27151 | 37480.0 |
| preprotein translocase, yajc subunit | HMPREF9698_00021 | O32052 | Positive | 27252 - 27602 | 13039.6 |
| hypothetical protein | HMPREF9698_00022 | Q88V07 | Positive | 27697 - 28821 | 42544.6 |
| hypothetical protein | HMPREF9698_00023 | O34921 | Positive | 28822 - 30123 | 48268.5 |
| hypothetical protein | HMPREF9698_00024 | Q8DTN6 | Positive | 30135 - 31103 | 35282.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
