Kingdom
Bacillati
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Alloiococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Bacilli |
| Order | Lactobacillales |
| Family | Carnobacteriaceae |
| Genus | Alloiococcus |
| Species | Alloiococcus otitis |
| Strain | ATCC 51267 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | ovoid |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic / microaerophile |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
498752 bp
Thymine Count
489587 bp
Guanine Count
404233 bp
Cytosine Count
391484 bp
Genome Length
1784056 bp
Protein-coding Genes
1583 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine kinase | HMPREF9698_00958 | P56904 | Negative | 1056384 - 1057184 | 28174.0 |
| thiamine-phosphate pyrophosphorylase | HMPREF9698_00959 | Q8G7X1 | Negative | 1057198 - 1057905 | 25493.4 |
| hydroxyethylthiazole kinase | HMPREF9698_00960 | B8DSX7 | Negative | 1057898 - 1058719 | 28952.6 |
| hypothetical protein | HMPREF9698_00961 | Not Available | Negative | 1059064 - 1059591 | 19587.8 |
| hypothetical protein | HMPREF9698_00962 | Not Available | Negative | 1059592 - 1060359 | 28495.4 |
| hypothetical protein | HMPREF9698_00963 | Not Available | Positive | 1060515 - 1060631 | 4446.41 |
| hypothetical protein | HMPREF9698_00964 | Not Available | Negative | 1060816 - 1061394 | 20436.9 |
| l-seryl-trna selenium transferase | HMPREF9698_00965 | C3L3I3 | Negative | 1061453 - 1062832 | 49979.0 |
| selenocysteine-specific translation elongation factor | HMPREF9698_00966 | Q46455 | Negative | 1062843 - 1064729 | 70111.6 |
| selenide, water dikinase | HMPREF9698_00967 | A9KPW1 | Negative | 1064772 - 1065680 | 32687.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
