Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase | HMPREF9696_04156 | Not Available | Positive | 4336072 - 4337544 | 52351.1 |
| hypothetical protein | HMPREF9696_04157 | Not Available | Positive | 4337998 - 4338882 | 31261.9 |
| precorrin 3b synthase cobz | HMPREF9696_04158 | Not Available | Positive | 4338922 - 4340352 | 51967.2 |
| citb domain-containing protein | HMPREF9696_04159 | Not Available | Positive | 4340336 - 4341550 | 44489.6 |
| hypothetical protein | HMPREF9696_04160 | Not Available | Negative | 4341893 - 4342345 | 17101.8 |
| hypothetical protein | HMPREF9696_04161 | Not Available | Positive | 4342507 - 4343241 | 26823.9 |
| hypothetical protein | HMPREF9696_04162 | Not Available | Positive | 4343331 - 4343435 | 3944.08 |
| pcar/pcau/pobr family beta-ketoadipate pathway transcriptional regulator | HMPREF9696_04163 | Not Available | Negative | 4343556 - 4344353 | 28948.1 |
| hypothetical protein | HMPREF9696_04164 | Not Available | Positive | 4344432 - 4345403 | 33942.2 |
| hypothetical protein | HMPREF9696_04165 | Not Available | Positive | 4345439 - 4346491 | 40145.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.