Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein cspa | HMPREF9696_03563 | Not Available | Negative | 3716830 - 3717042 | 7505.81 |
| translation initiation factor if-1 | HMPREF9696_03564 | Not Available | Negative | 3717310 - 3717600 | 10802.1 |
| hypothetical protein | HMPREF9696_03565 | Not Available | Negative | 3717640 - 3719115 | 53612.6 |
| urea abc transporter, urea binding protein | HMPREF9696_03566 | Not Available | Positive | 3719644 - 3720963 | 48069.6 |
| urea abc transporter, permease urtb | HMPREF9696_03567 | Not Available | Positive | 3721091 - 3722653 | 54826.5 |
| urea abc transporter, permease urtc | HMPREF9696_03568 | Not Available | Positive | 3722650 - 3723828 | 42307.7 |
| urea abc transporter, atp-binding protein urtd | HMPREF9696_03569 | Not Available | Positive | 3723834 - 3724595 | 28191.9 |
| urea abc transporter, atp-binding protein urte | HMPREF9696_03570 | Not Available | Positive | 3724658 - 3725353 | 25149.7 |
| urease accessory protein ured | HMPREF9696_03571 | Not Available | Positive | 3725378 - 3726211 | 29630.5 |
| urease subunit gamma | HMPREF9696_03572 | Not Available | Positive | 3726267 - 3726569 | 11091.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.