Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF9696_00171 | Not Available | Positive | 189164 - 192250 | 110772.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 190135 - 191611 | Not Available |
| hypothetical protein | HMPREF9696_00172 | Not Available | Positive | 192268 - 192441 | 6541.2 |
| hypothetical protein | HMPREF9696_00173 | Not Available | Positive | 192438 - 193106 | 23834.7 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 192509 - 195324 | Not Available |
| hypothetical protein | HMPREF9696_00174 | Not Available | Positive | 193106 - 195562 | 87760.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 195398 - 195511 | Not Available |
| hypothetical protein | HMPREF9696_00175 | Not Available | Positive | 195552 - 196640 | 39861.6 |
| hypothetical protein | HMPREF9696_00176 | Not Available | Positive | 196746 - 197585 | 30250.8 |
| hypothetical protein | HMPREF9696_00177 | Not Available | Negative | 197582 - 198340 | 27249.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.