Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase/carbamoylase family amidase | HMPREF9696_00161 | Not Available | Negative | 177351 - 178619 | 44739.0 |
| nickel-responsive transcriptional regulator nikr | HMPREF9696_00162 | Not Available | Negative | 178671 - 179126 | 16822.9 |
| hypothetical protein | HMPREF9696_00163 | Not Available | Positive | 179463 - 180437 | 34534.9 |
| hypothetical protein | HMPREF9696_00164 | Not Available | Positive | 180507 - 180992 | 17220.0 |
| hypothetical protein | HMPREF9696_00165 | Not Available | Positive | 181005 - 182513 | 52542.6 |
| hypothetical protein | HMPREF9696_00166 | Not Available | Positive | 182661 - 183839 | 42400.9 |
| taxi family trap transporter solute receptor | HMPREF9696_00167 | Not Available | Negative | 183898 - 184866 | 34132.2 |
| trap transporter, 4tm/12tm fusion protein | HMPREF9696_00168 | Not Available | Negative | 184891 - 186906 | 71709.1 |
| hypothetical protein | HMPREF9696_00169 | Not Available | Positive | 187249 - 187950 | 25665.9 |
| efflux transporter, rnd family, mfp subunit | HMPREF9696_00170 | Not Available | Positive | 187952 - 189142 | 42503.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.