Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_00111 | Not Available | Positive | 120383 - 121339 | 34556.0 |
| homogentisate 1,2-dioxygenase | HMPREF9696_00112 | Not Available | Positive | 121344 - 122690 | 49469.7 |
| maleylacetoacetate isomerase | HMPREF9696_00113 | Not Available | Positive | 122882 - 123520 | 23277.0 |
| fumarylacetoacetase | HMPREF9696_00114 | Not Available | Positive | 123533 - 124807 | 46632.7 |
| hypothetical protein | HMPREF9696_00115 | Not Available | Negative | 125094 - 125567 | 17433.0 |
| 4-hydroxyphenylpyruvate dioxygenase | HMPREF9696_00116 | Not Available | Positive | 125694 - 126818 | 41468.1 |
| hypothetical protein | HMPREF9696_00117 | Not Available | Negative | 126928 - 127794 | 31622.9 |
| hypothetical protein | HMPREF9696_00118 | Not Available | Positive | 128000 - 129133 | 40125.2 |
| amidohydrolase | HMPREF9696_00119 | Not Available | Positive | 129183 - 130349 | 41944.5 |
| hypothetical protein | HMPREF9696_00120 | Not Available | Positive | 130446 - 130739 | 10684.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.