Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_00969 | Not Available | Negative | 1058808 - 1059365 | 19346.5 |
| 7-cyano-7-deazaguanine synthase | HMPREF9696_00970 | Not Available | Negative | 1059362 - 1060090 | 26377.4 |
| mazg family protein | HMPREF9696_00971 | Not Available | Positive | 1060186 - 1060998 | 30001.6 |
| gtp-binding protein hflx | HMPREF9696_00972 | Not Available | Negative | 1061246 - 1062499 | 46220.7 |
| protein hfq | HMPREF9696_00973 | Not Available | Negative | 1062635 - 1062883 | 9167.13 |
| d-amino-acid transaminase | HMPREF9696_00974 | Not Available | Negative | 1063054 - 1063911 | 31986.3 |
| nitrogen assimilation regulatory protein ntrx | HMPREF9696_00975 | Not Available | Negative | 1063916 - 1065286 | 50139.5 |
| pas domain s-box protein | HMPREF9696_00976 | Not Available | Negative | 1065304 - 1067574 | 83180.4 |
| nitrogen assimilation regulatory protein | HMPREF9696_00977 | Not Available | Negative | 1067790 - 1069232 | 52978.2 |
| nitrogen regulation protein ntrb | HMPREF9696_00978 | Not Available | Negative | 1069235 - 1070410 | 42532.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.