Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_00959 | Not Available | Positive | 1033887 - 1034333 | 15654.8 |
| t1ss-143 repeat domain-containing protein | HMPREF9696_00960 | Not Available | Negative | 1034403 - 1049291 | 513734.0 |
| hypothetical protein | HMPREF9696_00961 | Not Available | Negative | 1049671 - 1050042 | 13110.2 |
| hypothetical protein | HMPREF9696_00962 | Not Available | Negative | 1050157 - 1051122 | 35370.3 |
| hlyd family type i secretion membrane fusion protein | HMPREF9696_00963 | Not Available | Negative | 1051309 - 1052640 | 49445.4 |
| type i secretion system atpase | HMPREF9696_00964 | Not Available | Negative | 1052627 - 1054822 | 78337.9 |
| tolc family type i secretion outer membrane protein | HMPREF9696_00965 | Not Available | Negative | 1055002 - 1056624 | 59372.3 |
| hypothetical protein | HMPREF9696_00966 | Not Available | Positive | 1057004 - 1057582 | 21590.6 |
| hypothetical protein | HMPREF9696_00967 | Not Available | Negative | 1057593 - 1057844 | 8939.89 |
| hypothetical protein | HMPREF9696_00968 | Not Available | Positive | 1057972 - 1058805 | 29486.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.