Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate kinase | HMPREF9696_00949 | Not Available | Positive | 1022345 - 1023040 | 25152.1 |
| hypothetical protein | HMPREF9696_00950 | Not Available | Positive | 1023037 - 1024086 | 37460.7 |
| methionyl-trna synthetase | HMPREF9696_00951 | Not Available | Positive | 1024171 - 1026138 | 72067.2 |
| tatd family hydrolase | HMPREF9696_00952 | Not Available | Positive | 1026144 - 1026938 | 28611.0 |
| hypothetical protein | HMPREF9696_00953 | Not Available | Positive | 1026935 - 1027735 | 29233.7 |
| hypothetical protein | HMPREF9696_00954 | Not Available | Negative | 1027851 - 1029497 | 58615.5 |
| dihydrodipicolinate synthase | HMPREF9696_00955 | Not Available | Negative | 1030112 - 1031080 | 34401.1 |
| hypothetical protein | HMPREF9696_00956 | Not Available | Negative | 1031090 - 1031530 | 16272.8 |
| hypothetical protein | HMPREF9696_00957 | Not Available | Negative | 1031565 - 1031846 | 9770.56 |
| hypothetical protein | HMPREF9696_00958 | Not Available | Negative | 1032194 - 1033786 | 59163.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.