Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylase | HMPREF9696_00891 | Not Available | Negative | 963944 - 965140 | 42570.1 |
| hypothetical protein | HMPREF9696_00892 | Not Available | Positive | 965289 - 966023 | 26412.8 |
| hypothetical protein | HMPREF9696_00893 | Not Available | Positive | 966020 - 966751 | 26531.5 |
| hypothetical protein | HMPREF9696_00894 | Not Available | Positive | 966841 - 967815 | 35083.4 |
| ribosomal protein s12 methylthiotransferase rimo | HMPREF9696_00895 | Not Available | Negative | 967934 - 969259 | 48973.8 |
| hypothetical protein | HMPREF9696_00896 | Not Available | Positive | 969373 - 969963 | 21975.8 |
| hypothetical protein | HMPREF9696_00897 | Not Available | Positive | 969960 - 971132 | 41908.3 |
| hypothetical protein | HMPREF9696_00898 | Not Available | Positive | 971487 - 972812 | 48363.2 |
| nitrate abc transporter, permease | HMPREF9696_00899 | Not Available | Positive | 972872 - 973771 | 32544.7 |
| nitrate abc transporter, atp-binding protein c and d | HMPREF9696_00900 | Not Available | Positive | 973783 - 974574 | 29437.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.