Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantetheine adenylyltransferase | HMPREF9696_00842 | Not Available | Positive | 917922 - 918422 | 17835.9 |
| hypothetical protein | HMPREF9696_00843 | Not Available | Positive | 918445 - 918987 | 19516.7 |
| hypothetical protein | HMPREF9696_00844 | Not Available | Positive | 919044 - 919511 | 16940.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | HMPREF9696_00845 | Not Available | Positive | 919537 - 920658 | 40436.5 |
| queuine trna-ribosyltransferase | HMPREF9696_00846 | Not Available | Positive | 920675 - 921808 | 41537.0 |
| hypothetical protein | HMPREF9696_00847 | Not Available | Negative | 921826 - 922038 | 7615.27 |
| cysteine synthase a | HMPREF9696_00848 | Not Available | Positive | 922270 - 923253 | 34466.8 |
| hypothetical protein | HMPREF9696_00849 | Not Available | Positive | 923255 - 923500 | 8791.41 |
| glycine/betaine/sarcosine/d-proline reductase family selenoprotein b | HMPREF9696_00850 | Not Available | Negative | 923515 - 924444 | 34248.2 |
| hypothetical protein | HMPREF9696_00851 | Not Available | Positive | 924553 - 924720 | 6376.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.