Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF9696_00031 | Not Available | Negative | 36223 - 39384 | 113561.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9696_00032 | Not Available | Negative | 39394 - 40596 | 42726.4 |
| hypothetical protein | HMPREF9696_00033 | Not Available | Positive | 40795 - 41571 | 25517.7 |
| hypothetical protein | HMPREF9696_00034 | Not Available | Negative | 41589 - 41945 | 13492.8 |
| hypothetical protein | HMPREF9696_00035 | Not Available | Positive | 42092 - 42313 | 7637.38 |
| hypothetical protein | HMPREF9696_00036 | Not Available | Positive | 42387 - 42596 | 7126.94 |
| hypothetical protein | HMPREF9696_00037 | Not Available | Positive | 42793 - 43047 | 9689.46 |
| efflux transporter, rnd family, mfp subunit | HMPREF9696_00038 | Not Available | Positive | 43225 - 44412 | 42633.8 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF9696_00039 | Not Available | Positive | 44409 - 47579 | 113907.0 |
| hypothetical protein | HMPREF9696_00040 | Not Available | Negative | 47576 - 48478 | 33151.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.