Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | HMPREF9696_03927 | Not Available | Negative | 4094957 - 4096879 | 68362.1 |
| exodeoxyribonuclease 7 small subunit | HMPREF9696_03928 | Not Available | Negative | 4097119 - 4097370 | 9238.82 |
| hypothetical protein | HMPREF9696_03929 | Not Available | Negative | 4097477 - 4098406 | 33767.9 |
| hypothetical protein | HMPREF9696_03930 | Not Available | Negative | 4098545 - 4099309 | 27613.0 |
| hypothetical protein | HMPREF9696_03931 | Not Available | Positive | 4099447 - 4100394 | 35045.8 |
| hypothetical protein | HMPREF9696_03932 | Not Available | Negative | 4100542 - 4102326 | 63095.3 |
| Trna-gln | Not Available | Not Available | Positive | 4102732 - 4102806 | Not Available |
| hypothetical protein | HMPREF9696_03933 | Not Available | Positive | 4103234 - 4103884 | 24414.0 |
| hypothetical protein | HMPREF9696_03934 | Not Available | Negative | 4103892 - 4106066 | 81086.5 |
| hypothetical protein | HMPREF9696_03935 | Not Available | Negative | 4106070 - 4107695 | 60500.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.