Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | HMPREF9696_03682 | Not Available | Positive | 3825184 - 3826449 | 45166.5 |
| tigr02302 family protein | HMPREF9696_03683 | Not Available | Positive | 3826632 - 3829193 | 92883.0 |
| hypothetical protein | HMPREF9696_03684 | Not Available | Positive | 3829400 - 3829798 | 14850.2 |
| hypothetical protein | HMPREF9696_03685 | Not Available | Positive | 3829842 - 3830279 | 15913.9 |
| hypothetical protein | HMPREF9696_03686 | Not Available | Positive | 3830321 - 3830851 | 19816.8 |
| hypothetical protein | HMPREF9696_03687 | Not Available | Positive | 3830869 - 3831267 | 14500.3 |
| hypothetical protein | HMPREF9696_03688 | Not Available | Positive | 3831291 - 3831836 | 20206.7 |
| redox-sensitive transcriptional activator soxr | HMPREF9696_03689 | Not Available | Negative | 3831858 - 3832325 | 16888.5 |
| hypothetical protein | HMPREF9696_03690 | Not Available | Positive | 3832424 - 3832813 | 14183.5 |
| hypothetical protein | HMPREF9696_03691 | Not Available | Negative | 3832830 - 3833618 | 27453.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.