Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_03523 | Not Available | Negative | 3671692 - 3672570 | 31725.7 |
| hypothetical protein | HMPREF9696_03524 | Not Available | Positive | 3672701 - 3674788 | 74175.1 |
| dicarboxylate-coa ligase pima | HMPREF9696_03525 | Not Available | Positive | 3674803 - 3676485 | 60799.3 |
| acetyl-coa c-acetyltransferase | HMPREF9696_03526 | Not Available | Positive | 3676482 - 3677666 | 41346.8 |
| pimeloyl-coa dehydrogenase, large subunit | HMPREF9696_03527 | Not Available | Positive | 3677856 - 3679043 | 44307.8 |
| pimeloyl-coa dehydrogenase, small subunit | HMPREF9696_03528 | Not Available | Positive | 3679210 - 3680349 | 40778.6 |
| hypothetical protein | HMPREF9696_03529 | Not Available | Positive | 3680528 - 3681301 | 26926.5 |
| glycerol kinase | HMPREF9696_03530 | Not Available | Positive | 3681547 - 3683055 | 54494.7 |
| hypothetical protein | HMPREF9696_03531 | Not Available | Positive | 3683138 - 3683764 | 23321.1 |
| hypothetical protein | HMPREF9696_03532 | Not Available | Negative | 3683839 - 3684399 | 20024.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.