Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_03463 | Not Available | Positive | 3611429 - 3612100 | 23835.0 |
| hypothetical protein | HMPREF9696_03464 | Not Available | Negative | 3612116 - 3612355 | 8787.7 |
| hypothetical protein | HMPREF9696_03465 | Not Available | Negative | 3612420 - 3613121 | 25822.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 | HMPREF9696_03466 | Not Available | Positive | 3613319 - 3614293 | 35351.6 |
| homoserine kinase | HMPREF9696_03467 | Not Available | Positive | 3614377 - 3615357 | 35920.2 |
| ribonuclease h | HMPREF9696_03468 | Not Available | Positive | 3615354 - 3615803 | 16657.7 |
| hypothetical protein | HMPREF9696_03469 | Not Available | Negative | 3615984 - 3616469 | 17358.9 |
| hypothetical protein | HMPREF9696_03470 | Not Available | Negative | 3616582 - 3617442 | 30236.2 |
| upf0301 protein | HMPREF9696_03471 | Not Available | Positive | 3617603 - 3618253 | 22827.5 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9696_03472 | Not Available | Negative | 3618361 - 3621366 | 109629.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.