Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 1 | HMPREF9696_03405 | Not Available | Positive | 3555433 - 3556938 | 55045.2 |
| protoheme ix farnesyltransferase | HMPREF9696_03406 | Not Available | Positive | 3557017 - 3557958 | 33520.9 |
| hypothetical protein | HMPREF9696_03407 | Not Available | Positive | 3557955 - 3558140 | 6640.48 |
| cytochrome c oxidase assembly protein ctag | HMPREF9696_03408 | Not Available | Positive | 3558158 - 3558766 | 22319.5 |
| hypothetical protein | HMPREF9696_03409 | Not Available | Positive | 3558824 - 3559720 | 33137.3 |
| hypothetical protein | HMPREF9696_03410 | Not Available | Positive | 3559834 - 3560226 | 14173.7 |
| hypothetical protein | HMPREF9696_03411 | Not Available | Positive | 3560223 - 3560990 | 27849.6 |
| threonine synthase | HMPREF9696_03412 | Not Available | Positive | 3561121 - 3562536 | 51188.4 |
| hypothetical protein | HMPREF9696_03413 | Not Available | Positive | 3562536 - 3563825 | 46233.8 |
| hypothetical protein | HMPREF9696_03414 | Not Available | Positive | 3563847 - 3564242 | 14078.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.