Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine-trna ligase | HMPREF9696_03375 | Not Available | Positive | 3519390 - 3521030 | 61127.9 |
| ybak/ebsc protein | HMPREF9696_03376 | Not Available | Positive | 3521050 - 3521523 | 16616.2 |
| hypothetical protein | HMPREF9696_03377 | Not Available | Negative | 3521533 - 3522159 | 22537.7 |
| hypothetical protein | HMPREF9696_03378 | Not Available | Positive | 3522377 - 3522721 | 12372.4 |
| dihydroorotate dehydrogenase | HMPREF9696_03379 | Not Available | Positive | 3522718 - 3523812 | 39021.3 |
| mate efflux family protein | HMPREF9696_03380 | Not Available | Negative | 3523787 - 3525082 | 45695.0 |
| hypothetical protein | HMPREF9696_03381 | Not Available | Negative | 3525140 - 3525445 | 11523.3 |
| hypothetical protein | HMPREF9696_03382 | Not Available | Negative | 3525512 - 3527188 | 62704.8 |
| hypothetical protein | HMPREF9696_03383 | Not Available | Negative | 3527185 - 3528216 | 36796.1 |
| hypothetical protein | HMPREF9696_03384 | Not Available | Positive | 3528217 - 3529224 | 35902.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.