Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna-[protein]-cysteine s-methyltransferase | HMPREF9696_03316 | Not Available | Positive | 3452112 - 3452648 | 19705.7 |
| hypothetical protein | HMPREF9696_03317 | Not Available | Negative | 3452695 - 3453252 | 20282.9 |
| hypothetical protein | HMPREF9696_03318 | Not Available | Negative | 3453270 - 3453965 | 24169.0 |
| tonb family domain-containing protein | HMPREF9696_03319 | Not Available | Negative | 3454113 - 3454865 | 26608.0 |
| tonb system transporter exbd | HMPREF9696_03320 | Not Available | Negative | 3454900 - 3455328 | 14906.3 |
| tonb-system energizer exbb | HMPREF9696_03321 | Not Available | Negative | 3455332 - 3456366 | 35261.9 |
| hypothetical protein | HMPREF9696_03322 | Not Available | Negative | 3456720 - 3458825 | 74769.9 |
| hypothetical protein | HMPREF9696_03323 | Not Available | Negative | 3459001 - 3460167 | 42536.6 |
| hypothetical protein | HMPREF9696_03324 | Not Available | Positive | 3460406 - 3462844 | 87501.8 |
| pkhd-type hydroxylase | HMPREF9696_03325 | Not Available | Positive | 3462996 - 3463676 | 25364.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.