Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_03247 | Not Available | Negative | 3378538 - 3379017 | 17880.0 |
| mate efflux family protein | HMPREF9696_03248 | Not Available | Negative | 3379014 - 3380420 | 49680.7 |
| hypothetical protein | HMPREF9696_03249 | Not Available | Negative | 3380528 - 3383083 | 90085.1 |
| dna gyrase, b subunit | HMPREF9696_03250 | Not Available | Negative | 3383213 - 3385657 | 89581.3 |
| dna replication and repair protein recf | HMPREF9696_03251 | Not Available | Negative | 3385910 - 3387049 | 40819.5 |
| dna polymerase iii, beta subunit | HMPREF9696_03252 | Not Available | Negative | 3387585 - 3388703 | 40424.6 |
| chromosomal replication initiator protein dnaa | HMPREF9696_03253 | Not Available | Negative | 3388946 - 3390415 | 54619.7 |
| 30s ribosomal protein s20 | HMPREF9696_03254 | Not Available | Negative | 3391604 - 3391870 | 9845.13 |
| hypothetical protein | HMPREF9696_03255 | Not Available | Positive | 3392182 - 3392499 | 11820.9 |
| peptide methionine sulfoxide reductase msra 1 | HMPREF9696_03256 | Not Available | Positive | 3392658 - 3393311 | 23410.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.