Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_03167 | Not Available | Positive | 3291188 - 3291514 | 11864.1 |
| hypothetical protein | HMPREF9696_03168 | Not Available | Positive | 3291817 - 3292233 | 16411.1 |
| 3-isopropylmalate dehydratase large subunit | HMPREF9696_03169 | Not Available | Negative | 3292314 - 3293726 | 50854.5 |
| hypothetical protein | HMPREF9696_03170 | Not Available | Positive | 3293856 - 3294272 | 14855.9 |
| 50s ribosomal protein l19 | HMPREF9696_03171 | Not Available | Negative | 3294335 - 3294733 | 14780.9 |
| trna (guanine-n(1)-)-methyltransferase | HMPREF9696_03172 | Not Available | Negative | 3294836 - 3295564 | 25865.1 |
| ribosome maturation factor rimm | HMPREF9696_03173 | Not Available | Negative | 3295581 - 3296114 | 19075.8 |
| 30s ribosomal protein s16 | HMPREF9696_03174 | Not Available | Negative | 3296122 - 3296454 | 12454.3 |
| signal recognition particle protein | HMPREF9696_03175 | Not Available | Negative | 3296500 - 3298047 | 54510.1 |
| hypothetical protein | HMPREF9696_03176 | Not Available | Positive | 3298282 - 3299373 | 40018.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.