Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | HMPREF9696_03040 | Not Available | Positive | 3162642 - 3164507 | 66931.0 |
| ribosomal rna small subunit methyltransferase g | HMPREF9696_03041 | Not Available | Positive | 3164510 - 3165166 | 23579.6 |
| hypothetical protein | HMPREF9696_03042 | Not Available | Positive | 3165186 - 3166055 | 31416.9 |
| parb-like partition protein | HMPREF9696_03043 | Not Available | Positive | 3166228 - 3167109 | 32146.3 |
| dna polymerase iii, delta subunit | HMPREF9696_03044 | Not Available | Negative | 3167197 - 3168225 | 36847.3 |
| hypothetical protein | HMPREF9696_03045 | Not Available | Negative | 3168250 - 3168804 | 20048.0 |
| leucyl-trna synthetase | HMPREF9696_03046 | Not Available | Negative | 3168791 - 3171421 | 98584.8 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9696_03047 | Not Available | Negative | 3171535 - 3173226 | 60948.5 |
| yggs family pyridoxal phosphate enzyme | HMPREF9696_03048 | Not Available | Positive | 3173334 - 3174023 | 24379.3 |
| hypothetical protein | HMPREF9696_03049 | Not Available | Negative | 3174172 - 3174720 | 20282.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
