Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_02912 | Not Available | Negative | 3032622 - 3033866 | 43711.8 |
| 2-oxoglutarate dehydrogenase e1 component | HMPREF9696_02913 | Not Available | Negative | 3033970 - 3036924 | 110414.0 |
| succinate-coa ligase, alpha subunit | HMPREF9696_02914 | Not Available | Negative | 3037057 - 3037941 | 30056.5 |
| succinyl-coa ligase | HMPREF9696_02915 | Not Available | Negative | 3037946 - 3039142 | 42353.3 |
| malate dehydrogenase | HMPREF9696_02916 | Not Available | Negative | 3039252 - 3040220 | 34008.5 |
| hypothetical protein | HMPREF9696_02917 | Not Available | Negative | 3040413 - 3041594 | 43610.2 |
| 2'-5' rna ligase | HMPREF9696_02918 | Not Available | Negative | 3041655 - 3042191 | 19554.4 |
| hypothetical protein | HMPREF9696_02919 | Not Available | Negative | 3042300 - 3042926 | 21686.2 |
| hypothetical protein | HMPREF9696_02920 | Not Available | Positive | 3043006 - 3043752 | 26344.5 |
| hypothetical protein | HMPREF9696_02921 | Not Available | Positive | 3043749 - 3046316 | 90065.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.